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https://hdl.handle.net/20.500.12348/2652
The complete mitochondrial genome of a Pabdah catfish, Ompok pabda (Hamilton, 1822)
| dc.creator | Alam, J. | en_US |
| dc.creator | Andriyono, S. | en_US |
| dc.creator | Hossain, A. | en_US |
| dc.creator | Eunus, A. | en_US |
| dc.creator | Kim, H. | en_US |
| dc.date.accessioned | 2019-02-12T01:42:40Z | |
| dc.date.available | 2019-02-12T01:42:40Z | |
| dc.identifier.citation | Jobaidul Alam, Sapto Andriyono, Arif Hossain, A. T. M Eunus. (2019). The complete mitochondrial genome of a Pabdah catfish, Ompok pabda (Hamilton, 1822). Mitochondrial DNA Part B: Resources, 4(1), pp. 507-508. | en_US |
| dc.identifier.issn | 2380-2359 | en_US |
| dc.identifier.uri | https://hdl.handle.net/20.500.12348/2652 | |
| dc.description.abstract | The complete mitochondrial genome of Pabdah catfish, Ompok pabda (Hamilton, 1822) was determined by MiSeq platform. The genome was 16,512 bp in length, in which canonical 13 protein-coding genes, 22 tRNAs, 2 rRNAs, and a control region (D-Loop) were encoded. The overall A + T (55.10%) content was higher than G + C (44.90%). Total nine genes were located at the L strand, and remaining 28 genes were at the H strand. The start codon of 12 protein-coding genes was ATG, except for COX1 (GTG). Incomplete stop codon (TA-/T–) was identified in six genes including COXII, COXIII, ND2, ND3, ND4, and Cytb. The mitogenome of O. pabda showed highest sequence identity with O. bimaculatus (86%). | en_US |
| dc.format | TXT | en_US |
| dc.language | en | en_US |
| dc.publisher | Taylor & Francis Open | en_US |
| dc.rights | CC-BY-4.0 | en_US |
| dc.source | Mitochondrial DNA Part B: Resources;4,(2019) Pagination 507,508 | en_US |
| dc.subject | catfish | en_US |
| dc.title | The complete mitochondrial genome of a Pabdah catfish, Ompok pabda (Hamilton, 1822) | en_US |
| dc.type | Journal Article | en_US |
| cg.contributor.crp | Fish | en_US |
| cg.contributor.funder | Ministry of Oceans and Fisheries | en_US |
| cg.contributor.project | WorldFish and Fish knowledge and data products | en_US |
| cg.coverage.country | Bangladesh | en_US |
| cg.coverage.region | Southern Asia | en_US |
| cg.subject.agrovoc | genetics | en_US |
| cg.contributor.affiliation | Universitas Airlangga | en_US |
| cg.contributor.affiliation | Bangladesh Ministry of Fisheries and Livestock, Department of Fisheries Bangladesh | en_US |
| cg.contributor.affiliation | Pukyong National University | en_US |
| cg.contributor.affiliation | Bangladesh Ministry of Fisheries And Livestock | en_US |
| cg.contributor.affiliation | WorldFish | en_US |
| cg.identifier.status | Open access | en_US |
| cg.identifier.ISIindexed | ISI indexed | en_US |
| cg.contribution.worldfishauthor | Eunus, A. | en_US |
| cg.description.theme | Sustainable aquaculture | en_US |
| dc.identifier.doi | https://dx.doi.org/10.1080/23802359.2018.1551079 | en_US |
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Sustainable aquaculture [2702]