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https://hdl.handle.net/20.500.12348/3422
Sibship assignment to the founders of a Bangladeshi Catla catla breeding population
dc.creator | Hamilton, M.G. | en_US |
dc.creator | Mekkawy, W. | en_US |
dc.creator | Benzie, J. | en_US |
dc.date.accessioned | 2019-05-15T09:07:34Z | |
dc.date.available | 2019-05-15T09:07:34Z | |
dc.date.issued | 2019 | en_US |
dc.identifier.citation | Matthew Hamilton, Wagdy Mekkawy, John Benzie. (29/4/2019). Sibship assignment to the founders of a Bangladeshi Catla catla breeding population. | en_US |
dc.identifier.issn | 0999-193X | en_US |
dc.identifier.uri | https://hdl.handle.net/20.500.12348/3422 | |
dc.description.abstract | In terms of quantity produced, Catla catla is the sixth most important finfish aquaculture species produced globally in 2015. It is primarily grown in South Asia, often on a small scale in polyculture with other species. In spite of its economic importance, in a number of countries, including Bangladesh, the quality of catla seed produced in hatcheries has historically suffered from high levels of inbreeding, uncontrolled interspecific hybridisation and negative selection. In an effort to address these issues, in 2012, fertilised spawn was collected from the Halda, Jamuna and Padma (Ganges) rivers, as part of a project funded by the United States Agency for International Development (USAID) to restock Bangladeshi catla hatcheries with genetically diverse and non-inbred broodstock. The aims of this study were to (1) develop and describe a panel of catla DArTseq-based silicoDArT and single nucleotide polymorphism (SNP) markers; (2) determine the extent of genetic relationships between, and assign putative sibship to, ‘candidate founders’ of the breeding population; and (3) examine molecular genetic variability among and within catla sampled from the three river systems. | en_US |
dc.format | en_US | |
dc.language | en | en_US |
dc.publisher | BioMed Central | en_US |
dc.rights | CC-BY-4.0 | en_US |
dc.source | Genetics Selection Evolution;(2019) | en_US |
dc.subject | genetic | en_US |
dc.subject | genotyping by sequencing | en_US |
dc.subject | parentage assignment | en_US |
dc.subject | genomic relationship | en_US |
dc.subject | additive genetic relationship | en_US |
dc.subject | silicodart marker | en_US |
dc.subject | Fish | en_US |
dc.title | Sibship assignment to the founders of a Bangladeshi Catla catla breeding population | en_US |
dc.type | Journal Article | en_US |
cg.contributor.crp | Fish | en_US |
cg.contributor.funder | United States Agency for International Development | en_US |
cg.contributor.funder | International Fund for Agricultural Development | en_US |
cg.contributor.project | Feed the Future Bangladesh Aquaculture and Nutrition Activity | en_US |
cg.coverage.country | Bangladesh | en_US |
cg.coverage.region | Southern Asia | en_US |
cg.subject.agrovoc | breeding | en_US |
cg.subject.agrovoc | single nucleotide polymorphism | en_US |
cg.subject.agrovoc | training | en_US |
cg.subject.agrovoc | fish seed | en_US |
cg.subject.agrovoc | carp | en_US |
cg.subject.agrovoc | cyprinidae | en_US |
cg.subject.agrovoc | goal 14 life below water | en_US |
cg.contributor.affiliation | Ain Shams University | en_US |
cg.contributor.affiliation | WorldFish | en_US |
cg.contributor.affiliation | University College Cork | en_US |
cg.identifier.status | Open access | en_US |
cg.identifier.ISIindexed | ISI indexed | en_US |
cg.contribution.worldfishauthor | Hamilton, M.G. | en_US |
cg.contribution.worldfishauthor | Mekkawy, W. | en_US |
cg.contribution.worldfishauthor | Benzie, J. | en_US |
cg.description.theme | Sustainable aquaculture | en_US |
dc.identifier.doi | https://dx.doi.org/10.1186/s12711-019-0454-x | en_US |
cg.creator.id | Matthew Gray Hamilton: 0000-0001-8098-8845 | en_US |
cg.creator.id | Wagdy Mekkawy: 0000-0002-3991-7321 | en_US |
cg.creator.id | John Benzie: 0000-0001-9599-8683 | en_US |
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Sustainable aquaculture [2644]