Development of Diversity Arrays Technology markers as a tool for rapid genomic assessment in Nile tilapia, Oreochromis niloticus

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cg.contribution.worldfishauthorLind, C.E.
cg.contribution.worldfishauthorBenzie, J.
cg.contributor.affiliationWorldFish
cg.contributor.affiliationUniversity of Canberra
cg.contributor.affiliationUniversity College Cork
cg.contributor.crpFish
cg.coverage.countryEgypt
cg.coverage.countryMalaysia
cg.description.themeAquacultureen_US
cg.identifier.ISIindexedISI indexed
cg.identifier.statusLimted access
cg.identifier.urlhttps://doi.org/10.1111/age.12536
cg.identifier.worldfish4079
cg.subject.agrovocgenetics
cg.subject.agrovoctilapia
cg.subject.cabitransgenic animals
cg.subject.worldfishGenetically Improved Farmed Tilapia (GIFT)
dc.creatorLind, C.E.
dc.creatorKilian, A.
dc.creatorBenzie, J.
dc.date.accessioned2018-07-30T09:18:41Z
dc.date.available2018-07-30T09:18:41Z
dc.date.issued2017
dc.description.abstractThe development of genomic markers is described for Nile tilapia, Oreochromis niloticus, using the Diversity Arrays Technology (DArT) genotype-by-sequencing platform. A total of 13 215 single nucleotide polymorphism (SNP) markers and 12 490 silicoDArT (dominant) markers were identified from broodstock of two selective breeding programs [Genetically Improved Farmed Tilapia (GIFT) strain from Malaysia and the Abbassa strain from Egypt]. Over 10 000 SNPs were polymorphic in either strain, and 2985 and 3087 showed strain-specific polymorphisms for the GIFT and Abbassa strains respectively. We demonstrate the potential utility of these markers for rapid genomic screening and use in breeding programs.
dc.description.versionPeer Review
dc.formatapplication/pdf
dc.identifier.citationAnimal Genetics, online first 17 Jan
dc.identifier.doihttps://doi.org/10.1111/age.12536en_US
dc.identifier.issn0268-9146
dc.identifier.urihttps://hdl.handle.net/20.500.12348/153
dc.publisherBlackwell Publishers
dc.sourceAnimal Genetics
dc.titleDevelopment of Diversity Arrays Technology markers as a tool for rapid genomic assessment in Nile tilapia, Oreochromis niloticus
dc.typeJournal Article
dcterms.bibliographicCitationLind, C.E.; Kilian, A.; Benzie, J.A.H. (2017). Development of Diversity Arrays Technology markers as a tool for rapid genomic assessment in Nile tilapia, Oreochromis niloticus. Animal Genetics, online first 17 Jan
worldfish.location.areaAfrica
worldfish.location.areaAsia

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