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Development of Diversity Arrays Technology markers as a tool for rapid genomic assessment in Nile tilapia, Oreochromis niloticus

dc.creatorLind, C.E.
dc.creatorKilian, A.
dc.creatorBenzie, J.
dc.date.accessioned2018-07-30T09:18:41Z
dc.date.available2018-07-30T09:18:41Z
dc.date.issued2017
dc.identifier.citationAnimal Genetics, online first 17 Jan
dc.identifier.issn0268-9146
dc.identifier.urihttps://hdl.handle.net/20.500.12348/153
dc.description.abstractThe development of genomic markers is described for Nile tilapia, Oreochromis niloticus, using the Diversity Arrays Technology (DArT) genotype-by-sequencing platform. A total of 13 215 single nucleotide polymorphism (SNP) markers and 12 490 silicoDArT (dominant) markers were identified from broodstock of two selective breeding programs [Genetically Improved Farmed Tilapia (GIFT) strain from Malaysia and the Abbassa strain from Egypt]. Over 10 000 SNPs were polymorphic in either strain, and 2985 and 3087 showed strain-specific polymorphisms for the GIFT and Abbassa strains respectively. We demonstrate the potential utility of these markers for rapid genomic screening and use in breeding programs.
dc.formatapplication/pdf
dc.publisherBlackwell Publishers
dc.sourceAnimal Genetics
dc.titleDevelopment of Diversity Arrays Technology markers as a tool for rapid genomic assessment in Nile tilapia, Oreochromis niloticus
dc.typeJournal Article
dcterms.bibliographicCitationLind, C.E.; Kilian, A.; Benzie, J.A.H. (2017). Development of Diversity Arrays Technology markers as a tool for rapid genomic assessment in Nile tilapia, Oreochromis niloticus. Animal Genetics, online first 17 Jan
dc.description.versionPeer Review
cg.contributor.crpFish
cg.coverage.countryEgypt
cg.coverage.countryMalaysia
cg.identifier.worldfish4079
cg.subject.agrovocgenetics
cg.subject.agrovoctilapia
cg.subject.cabitransgenic animals
cg.subject.worldfishGenetically Improved Farmed Tilapia (GIFT)
cg.contributor.affiliationWorldFish
cg.contributor.affiliationUniversity of Canberra
cg.contributor.affiliationUniversity College Cork
cg.identifier.statusLimted access
cg.identifier.ISIindexedISI indexed
cg.contribution.worldfishauthorLind, C.E.
cg.contribution.worldfishauthorBenzie, J.
cg.description.themeSustainable aquaculture
dc.identifier.doihttps://doi.org/10.1111/age.12536en_US
cg.identifier.urlhttps://doi.org/10.1111/age.12536
worldfish.location.areaAfrica
worldfish.location.areaAsia


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